The Coding Manual for Qualitative Researchers
The Coding Manual fourth edition is reformatted to 15 chapters and divided into three parts, as opposed to six chapters in the third edition.This provides readers with more stra...
Publications
Explore 359 academic publications
Showing 12 of
359 publications
jModelTest: Phylogenetic Model Averaging
jModelTest is a new program for the statistical selection of models of nucleotide substitution based on "Phyml" (Guindon and Gascuel 2003. A simple, fast, and accurate algorithm...
R: A Language for Data Analysis and Graphics
Abstract In this article we discuss our experience designing and implementing a statistical computing language. In developing this new language, we sought to combine what we fel...
Optical Properties and Electronic Structure of Amorphous Germanium
Abstract The optical constants of amorphous Ge are determined for the photon energies from 0.08 to 1.6 eV. From 0.08 to 0.5 eV, the absorption is due to k ‐conserving transition...
Tree View: An application to display phylogenetic trees on personal computers
TreeView is a simple, easy to use phylogenetic tree viewing utility that runs under both MacOS (on Apple Macintosh computers) and under Microsoft Windows on Intel based computer...
Data Structures for Statistical Computing in Python
In this paper we are concerned with the practical issues of working with data sets common to finance, statistics, and other related fields. pandas is a new library which aims to...
<scp>micro</scp>‐<scp>checker</scp>: software for identifying and correcting genotyping errors in microsatellite data
Abstract DNA degradation, low DNA concentrations and primer‐site mutations may result in the incorrect assignment of microsatellite genotypes, potentially biasing population gen...
Bayesian Phylogenetics with BEAUti and the BEAST 1.7
Computational evolutionary biology, statistical phylogenetics and coalescent-based population genetics are becoming increasingly central to the analysis and understanding of mol...
SExtractor: Software for source extraction
International audience
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
Bayesian inference of phylogeny using Markov chain Monte Carlo (MCMC) plays a central role in understanding evolutionary history from molecular sequence data. Visualizing and an...