Publications
Explore 481 academic publications
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
Abstract GetOrganelle is a state-of-the-art toolkit to accurately assemble organelle genomes from whole genome sequencing data. It recruits organelle-associated reads using a mo...
CODA: convergence diagnosis and output analysis for MCMC
[1st paragraph] At first sight, Bayesian inference with Markov Chain Monte Carlo (MCMC) appears to be straightforward. The user defines a full probability model, perhaps using o...
Reconfigurable Intelligent Surfaces for Energy Efficiency in Wireless Communication
The adoption of a Reconfigurable Intelligent Surface (RIS) for downlink multi-user communication from a multi-antenna base station is investigated in this paper. We develop ener...
Covalent Organic Frameworks: Design, Synthesis, and Functions
Covalent organic frameworks (COFs) are a class of crystalline porous organic polymers with permanent porosity and highly ordered structures. Unlike other polymers, a significant...
GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor
Abstract Microarray technology has become a standard molecular biology tool. Experimental data have been generated on a huge number of organisms, tissue types, treatment conditi...
A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation.
Abstract We previously developed a cladistic approach to identify subsets of haplotypes defined by restriction endonuclease mapping or DNA sequencing that are associated with si...
Belief in the law of small numbers.
Reports that people have erroneous intuitions about the laws of chance. In particular, they regard a sample randomly drawn from a population as highly representative, I.e., simi...
A Capital Asset Pricing Model with Time-Varying Covariances
The capital asset pricing model provides a theoretical structure for the pricing of assets with uncertain returns. The premium to induc e risk-averse investors to bear risk is p...
Bayesian Coalescent Inference of Past Population Dynamics from Molecular Sequences
We introduce the Bayesian skyline plot, a new method for estimating past population dynamics through time from a sample of molecular sequences without dependence on a prespecifi...