Publications

DCSE, an interactive tool for sequence alignment and secondary structure research

DCSE provides a user-friendly package for the creation and editing of sequence alignments. The program runs on different platforms, including microcomputers and workstations. Ap...

Molecular Phylogeny of Northern Hemisphere Species of<i>Armillaria</i>

This study used polymerase chain reaction amplification and direct sequencing of double-stranded DNA to compare the intergenic region between the 3′ end of the 26S gene and the ...

Lattice-based optimization of sequence classification criteria for neural-network acoustic modeling

Acoustic models used in hidden Markov model/neural-network (HMM/NN) speech recognition systems are usually trained with a frame-based cross-entropy error criterion. In contrast,...

An inventory of 1152 expressed sequence tags obtained by partial sequencing of cDNAs from <i>Arabidopsis thaliana</i>^†

As part of the goal to generate a detailed transcript map for Arabidopsis thaliana , 1152 single run sequences (expressed sequence tags or ESTs) have been determined from cDNA c...

Sparse reconstruction by convex relaxation: Fourier and Gaussian measurements

This paper proves best known guarantees for exact reconstruction of a sparse signal f from few non-adaptive universal linear measurements. We consider Fourier measurements (rand...

The Phusion Assembler

The Phusion assembler has assembled the mouse genome from the whole-genome shotgun (WGS) dataset collected by the Mouse Genome Sequencing Consortium, at ∼7.5× sequence coverage,...

An empirical examination of the amortized spread1Prior versions of this paper were entitled, `Bid–ask spreads, holding periods, and realized transaction costs.' We are grateful for many helpful comments from Yakov Amihud, Jennifer Conrad, Larry Dann, Diane Del Guercio, Dave Denis, Diane Denis, Craig Dunbar, Ed Dyl, Roger Edelen, Rob Hansen, Mark Huson, Raman Kumar, Chris Lamoureux, John McConnell, Wayne Mikkelson, Megan Partch, Henri Servaes, Vijay Singal, Mike Weisbach, Marc Zenner, and an anonymous referee. In addition, we appreciate the comments from seminar participants at the 1997 American Finance Association meetings, the University of Arizona, Kansas State University, the University of North Carolina, the 1996 Pacific Northwest Finance Conference, Virginia Polytechnic Institute, and the University of Wisconsin. This work has been partially supported by a summer research grant from the Pamplin College of Business.1

Minimal homology requirements for PCR primers

Journal Article Minimal homology requirements for PCR primers Get access Ralf Sommer, Ralf Sommer Institut für Genetik und Mikrobiologie der Univcrsiät MünchenMaria-Wardstrasse ...

Auto-encoder bottleneck features using deep belief networks

Neural network (NN) bottleneck (BN) features are typically created by training a NN with a middle bottleneck layer. Recently, an alternative structure was proposed which trains ...

Computation with Infinite Neural Networks

For neural networks with a wide class of weight priors, it can be shown that in the limit of an infinite number of hidden units, the prior over functions tends to a gaussian pro...

A statistical approach to automatic speech recognition using the atomic speech units constructed from overlapping articulatory features

In recent years, the development of a feature-based general statistical framework has been pursued for automatic speech recognition via novel designs of minimal or atomic units ...

Molecular Phylogeny of Northern Hemisphere Species of Armillaria

ABSTRACTThis study used polymerase chain reaction amplification and direct sequencing of double-stranded DNA to compare the intergenic region between the 3′ end of the 26S gene ...