Publications
Explore 411 academic publications
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
We have developed a new set of algorithms, collectively called “Velvet,” to manipulate de Bruijn graphs for genomic sequence assembly. A de Bruijn graph is a compact representat...
A Reliability Coefficient for Maximum Likelihood Factor Analysis
Maximum likelihood factor analysis provides an effective method for estimation of factor matrices and a useful test statistic in the likelihood ratio for rejection of overly sim...
Science, Technology and Innovation (STI) Policy for Sustainable Development
Recent developments about the extension of high-order Residual-Based Compact schemes to unsteady flows and complex configurations are discussed, with application to scale-resolv...
Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in <i>Phenix</i>
Diffraction (X-ray, neutron and electron) and electron cryo-microscopy are powerful methods to determine three-dimensional macromolecular structures, which are required to under...