Protein complex prediction with AlphaFold-Multimer
While the vast majority of well-structured single protein chains can now be predicted to high accuracy due to the recent AlphaFold [1] model, the prediction of multi-chain prote...
Publications
Explore 431 academic publications
Showing 12 of
431 publications
eggNOG-mapper v2: Functional Annotation, Orthology Assignments, and Domain Prediction at the Metagenomic Scale
Abstract Even though automated functional annotation of genes represents a fundamental step in most genomic and metagenomic workflows, it remains challenging at large scales. He...
An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics
For a decade, The Cancer Genome Atlas (TCGA) program collected clinicopathologic annotation data along with multi-platform molecular profiles of more than 11,000 human tumors ac...
Superconductivity of Metals and Alloys
Drawn from the author's introductory course at the University of Orsay, Superconductivity of Metals and Alloys is intended to explain the basic knowledge of superconductivity fo...
Software update: The <scp>ORCA</scp> program system—Version 5.0
Abstract Version 5.0 of the ORCA quantum chemistry program suite was released in July 2021. ORCA 5.0 represents a major improvement over all previous versions of ORCA and featur...
Random graphs with arbitrary degree distributions and their applications
Recent work on the structure of social networks and the internet has focused attention on graphs with distributions of vertex degree that are significantly different from the Po...
<i>Gaia</i>Early Data Release 3
Context. We present the early installment of the third Gaia data release, Gaia EDR3, consisting of astrometry and photometry for 1.8 billion sources brighter than magnitude 21, ...
The Gene Ontology resource: enriching a GOld mine
Abstract The Gene Ontology Consortium (GOC) provides the most comprehensive resource currently available for computable knowledge regarding the functions of genes and gene produ...
Planck 2018 results. VI. Cosmological parameters
We present cosmological parameter results from the final full-mission Planck\nmeasurements of the CMB anisotropies. We find good consistency with the\nstandard spatially-flat 6-...
CADD: predicting the deleteriousness of variants throughout the human genome
Combined Annotation-Dependent Depletion (CADD) is a widely used measure of variant deleteriousness that can effectively prioritize causal variants in genetic analyses, particula...
Standardization of Spirometry 2019 Update. An Official American Thoracic Society and European Respiratory Society Technical Statement
<b>Background:</b> Spirometry is the most common pulmonary function test. It is widely used in the assessment of lung function to provide objective information used in the diagn...
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
Abstract GetOrganelle is a state-of-the-art toolkit to accurately assemble organelle genomes from whole genome sequencing data. It recruits organelle-associated reads using a mo...