The PRIDE database and related tools and resources in 2019: improving support for quantification data

2018 Nucleic Acids Research 7,132 citations

Abstract

This FAIRsharing record describes: The PRIDE PRoteomics IDEntifications (PRIDE) Archive database is a centralized, standards compliant, public data repository for mass spectrometry proteomics data, including protein and peptide identifications and the corresponding expression values, post-translational modifications and supporting mass spectra evidence (both as raw data and peak list files). PRIDE is a core member in the ProteomeXchange (PX) consortium, which provides a standardised way for submitting mass spectrometry based proteomics data to public-domain repositories.

Keywords

BiologyDatabasePrideComputational biologyData scienceBioinformaticsComputer science

MeSH Terms

DatabasesProteinMass SpectrometryPeptidesProteomicsSoftware

Affiliated Institutions

Related Publications

Publication Info

Year
2018
Type
article
Volume
47
Issue
D1
Pages
D442-D450
Citations
7132
Access
Closed

Social Impact

Social media, news, blog, policy document mentions

Citation Metrics

7132
OpenAlex
319
Influential
6547
CrossRef

Cite This

Yasset Pérez‐Riverol, Attila Csordás, Jingwen Bai et al. (2018). The PRIDE database and related tools and resources in 2019: improving support for quantification data. Nucleic Acids Research , 47 (D1) , D442-D450. https://doi.org/10.1093/nar/gky1106

Identifiers

DOI
10.1093/nar/gky1106
PMID
30395289
PMCID
PMC6323896

Data Quality

Data completeness: 90%