Alvis Brāzma

The PRIDE database and related tools and resources in 2019: improving support for quantification data

This FAIRsharing record describes: The PRIDE PRoteomics IDEntifications (PRIDE) Archive database is a centralized, standards compliant, public data repository for mass spectrome...

The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences

Abstract The PRoteomics IDEntifications (PRIDE) database (https://www.ebi.ac.uk/pride/) is the world's largest data repository of mass spectrometry-based proteomics data. PRIDE ...

Minimum information about a microarray experiment (MIAME)—toward standards for microarray data

ArrayExpress update--an archive of microarray and high-throughput sequencing-based functional genomics experiments

The ArrayExpress Archive (http://www.ebi.ac.uk/arrayexpress) is one of the three international public repositories of functional genomics data supporting publications. It includ...

Expression Atlas update—an integrated database of gene and protein expression in humans, animals and plants

Expression Atlas (http://www.ebi.ac.uk/gxa) provides information about gene and protein expression in animal and plant samples of different cell types, organism parts, developme...

Transcriptome and genome sequencing uncovers functional variation in humans