Abstract

Abstract Summary: Visualizing genes’ structure and annotated features helps biologists to investigate their function and evolution intuitively. The Gene Structure Display Server (GSDS) has been widely used by more than 60 000 users since its first publication in 2007. Here, we reported the upgraded GSDS 2.0 with a newly designed interface, supports for more types of annotation features and formats, as well as an integrated visual editor for editing the generated figure. Moreover, a user-specified phylogenetic tree can be added to facilitate further evolutionary analysis. The full source code is also available for downloading. Availability and implementation: Web server and source code are freely available at http://gsds.cbi.pku.edu.cn. Contact: gaog@mail.cbi.pku.edu.cn or gsds@mail.cbi.pku.edu.cn Supplementary information: Supplementary data are available at Bioinformatics online.

Keywords

UploadComputer scienceSource codeVisualizationAnnotationFeature (linguistics)Tree (set theory)Code (set theory)Web serverInterface (matter)World Wide WebThe InternetProgramming languageOperating systemData miningArtificial intelligence

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Publication Info

Year
2014
Type
article
Volume
31
Issue
8
Pages
1296-1297
Citations
4589
Access
Closed

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Bo Hu, Jinpu Jin, An‐Yuan Guo et al. (2014). GSDS 2.0: an upgraded gene feature visualization server. Bioinformatics , 31 (8) , 1296-1297. https://doi.org/10.1093/bioinformatics/btu817

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DOI
10.1093/bioinformatics/btu817