Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
Bayesian inference of phylogeny using Markov chain Monte Carlo (MCMC) plays a central role in understanding evolutionary history from molecular sequence data. Visualizing and an...
Publications
View AllBayesian phylogenetic and phylodynamic data integration using BEAST 1.10
The Bayesian Evolutionary Analysis by Sampling Trees (BEAST) software package has become a primary tool for Bayesian phylogenetic and phylodynamic inference from genetic sequenc...
Improving Bayesian Population Dynamics Inference: A Coalescent-Based Model for Multiple Loci
Effective population size is fundamental in population genetics and characterizes genetic diversity. To infer past population dynamics from molecular sequence data, coalescent-b...
SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics
Abstract Summary: SPREAD is a user-friendly, cross-platform application to analyze and visualize Bayesian phylogeographic reconstructions incorporating spatial–temporal diffusio...
Simultaneously reconstructing viral cross-species transmission history and identifying the underlying constraints
The factors that determine the origin and fate of cross-species transmission events remain unclear for the majority of human pathogens, despite being central for the development...
Institution Info
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- facility
- Country
- BE
- Publications
- 5
- Citations
- 15,177
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- ROR
- https://ror.org/03w5j8p12