Tandy Warnow - Researcher Profile | RDL Research Database

Publications

3 shown

PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences

Siavash Mirarab , Nam Nguyen , Sheng Guo +3 more

We introduce PASTA, a new multiple sequence alignment algorithm. PASTA uses a new technique to produce an alignment given a guide tree that enables it to be both highly scalable...

2014 Journal of Computational Biology 446 citations

Ultra-large alignments using phylogeny-aware profiles

Nam Nguyen , Siavash Mirarab , Keerthana Kumar +1 more

2015 Genome Biology 146 citations

F<scp>AST</scp>SP: linear time calculation of alignment accuracy

Siavash Mirarab , Tandy Warnow

Abstract Motivation: Multiple sequence alignment is a basic part of much biological research, including phylogeny estimation and protein structure and function prediction. Diffe...

2011 Bioinformatics 63 citations

Frequent Co-Authors

Researcher Info

h-index: 3
Publications: 3
Citations: 655
Institution: The University of Texas at Austin

External Links

ORCID Profile Google Scholar

Identifiers

ORCID: 0000-0001-7717-3514

Impact Metrics

h-index 3

h-index: Number of publications with at least h citations each.