Barry R. Zeebèrg

GoMiner: a resource for biological interpretation of genomic and proteomic data

AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets

Abstract Motivation: Affymetrix microarrays are widely used to measure global expression of mRNA transcripts. That technology is based on the concept of a probe set. Individual ...

High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID)

Abstract Background We previously developed GoMiner, an application that organizes lists of 'interesting' genes (for example, under-and overexpressed genes from a microarray exp...

RedundancyMiner: De-replication of redundant GO categories in microarray and proteomics analysis

RedundancyMiner effectively eliminated redundancies from a set of GO categories. For illustration, we have applied it to the clarification of the results arising from two curren...