Publications

Kingdom protozoa and its 18 phyla.

The demarcation of protist kingdoms is reviewed, a complete revised classification down to the level of subclass is provided for the kingdoms Protozoa, Archezoa, and Chromista, ...

Evolution of the Marketing Organization: New Forms for Turbulent Environments

Rapid changes in industrial structure and global competition have occurred in the last two decades. The changes herald the post-industrial era, producing an environment of ambig...

Using allele frequencies and geographic subdivision to reconstruct gene trees within a species: molecular variance parsimony.

Abstract We formalize the use of allele frequency and geographic information for the construction of gene trees at the intraspecific level and extend the concept of evolutionary...

Inferring species phylogenies from multiple genes: Concatenated sequence tree versus consensus gene tree

Abstract Phylogenetic trees from multiple genes can be obtained in two fundamentally different ways. In one, gene sequences are concatenated into a super‐gene alignment, which i...

Inheritance of Functional Foreign Genes in Plants

Morphologically normal plants were regenerated from Nicotiana plumbaginifolia cells transformed with an Agrobacterium tumefaciens strain containing a tumor-inducing plasmid with...

Bayesian random local clocks, or one rate to rule them all

The examples suggest that large sequence datasets may only require a small number of local molecular clocks to reconcile their branch lengths with a time scale. All of the analy...

Essays in experimental logic.

This critical edition of John Dewey's 1916 collection of writings on logic, in Experimental Logic - in which Dewey presents his concept of logic as the theory of inquiry and hi...

CLIMATE-RELATED CHANGE IN AN INTERTIDAL COMMUNITY OVER SHORT AND LONG TIME SCALES

Changes in the abundance of macroinvertebrate species documented in a rocky intertidal community between surveys in 1931–1933 and 1993–1996 are consistent with the predicted eff...

Many-core algorithms for statistical phylogenetics

Abstract Motivation: Statistical phylogenetics is computationally intensive, resulting in considerable attention meted on techniques for parallelization. Codon-based models allo...

Root Probabilities for Intraspecific Gene Trees under Neutral Coalescent Theory

Performance-Based Selection of Likelihood Models for Phylogeny Estimation

Phylogenetic estimation has largely come to rely on explicitly model-based methods. This approach requires that a model be chosen and that that choice be justified. To date, jus...

Model Selection in Phylogenetics

▪ Abstract Investigation into model selection has a long history in the statistical literature. As model-based approaches begin dominating systematic biology, increased attentio...