A fast and elitist multiobjective genetic algorithm: NSGA-II
Multi-objective evolutionary algorithms (MOEAs) that use non-dominated sorting and sharing have been criticized mainly for: (1) their O(MN/sup 3/) computational complexity (wher...
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EMBI
Requirements are an integral part of industry operation and projects. Not only do requirements dictate industrial operations, but they are used in legally binding contracts betw...
The Hospital Anxiety and Depression Scale
ABSTRACT– A self‐assessment scale has been developed and found to be a reliable instrument for detecting states of depression and anxiety in the setting of an hospital medical o...
MUSCLE: multiple sequence alignment with high accuracy and high throughput
We describe MUSCLE, a new computer program for creating multiple alignments of protein sequences. Elements of the algorithm include fast distance estimation using kmer counting,...
<i>Ab initio</i>molecular dynamics for liquid metals
We present ab initio quantum-mechanical molecular-dynamics calculations based on the calculation of the electronic ground state and of the Hellmann-Feynman forces in the local-d...
Densely Connected Convolutional Networks
Recent work has shown that convolutional networks can be substantially deeper, more accurate, and efficient to train if they contain shorter connections between layers close to ...
<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data
Abstract Summary: It is expected that emerging digital gene expression (DGE) technologies will overtake microarray technologies in the near future for many functional genomics a...
XGBoost
Tree boosting is a highly effective and widely used machine learning method.\nIn this paper, we describe a scalable end-to-end tree boosting system called\nXGBoost, which is use...
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP
The recently-developed statistical method known as the "bootstrap" can be used to place confidence intervals on phylogenies. It involves resampling points from one's own data, w...