Publications
Explore 8,490 academic publications
Fast and accurate long-read alignment with Burrows–Wheeler transform
Abstract Motivation: Many programs for aligning short sequencing reads to a reference genome have been developed in the last 2 years. Most of them are very efficient for short r...
APE: Analyses of Phylogenetics and Evolution in R language
Abstract Summary: Analysis of Phylogenetics and Evolution (APE) is a package written in the R language for use in molecular evolution and phylogenetics. APE provides both utilit...
Stages of embryonic development of the zebrafish
Abstract We describe a series of stages for development of the embryo of the zebrafish, Danio (Brachydanio) rerio . We define seven broad periods of embryogenesis—the zygote, cl...
UK Biobank: An Open Access Resource for Identifying the Causes of a Wide Range of Complex Diseases of Middle and Old Age
Cathie Sudlow and colleagues describe the UK Biobank, a large population-based prospective study, established to allow investigation of the genetic and non-genetic determinants ...
Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments
The problem of identifying differentially expressed genes in designed microarray experiments is considered. Lonnstedt and Speed (2002) derived an expression for the posterior od...
Modularity and community structure in networks
Many networks of interest in the sciences, including social networks, computer networks, and metabolic and regulatory networks, are found to divide naturally into communities or...