Abstract
The European database on SSU rRNA can be consulted via the World WideWeb at http://rrna.uia.ac.be/ssu/ and compiles all complete or nearly complete small subunit ribosomal RNA sequences. Sequences are provided in aligned format. The alignment takes into account the secondary structure information derived by comparative sequence analysis of thousands of sequences. Additional information such as literature references, taxonomy, secondary structure models and nucleotide variability maps, is also available.
Keywords
BiologyRibosomal RNA5.8S ribosomal RNAComputational biologyProtein subunitRNAGeneticsSequence (biology)RibosomeGene
Affiliated Institutions
Related Publications
The European Large Subunit Ribosomal RNA database
The European Large Subunit (LSU) Ribosomal RNA (rRNA) database is accessible via the rRNA WWW Server at URL http://rrna.uia.ac.be/lsu/. It is a curated database that compiles co...
The European Large Subunit Ribosomal RNA Database
The European Large Subunit Ribosomal RNA Database compiles all complete or nearly complete large subunit ribosomal RNA sequences available from public sequence databases. These ...
The 3′-terminal sequence of the small subunit ribosomal RNA from hamster mitochondria
The 220 3'-terminal nucleotides of the small ribosomal subunit RNA (13S) of hamster (BHK-21) cell mitochondria have been sequenced and the positions of post-transcriptionally me...
The RDP-II (Ribosomal Database Project)
The Ribosomal Database Project (RDP-II), previously described by Maidak et al. [Nucleic Acids Res. (2000), 28, 173-174], continued during the past year to add new rRNA sequences...
The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
The Ribosomal Database Project (RDP-II) provides the research community with aligned and annotated rRNA gene sequences, along with analysis services and a phylogenetically consi...
Publication Info
- Year
- 2002
- Type
- article
- Volume
- 30
- Issue
- 1
- Pages
- 183-185
- Citations
- 250
- Access
- Closed
External Links
Social Impact
Altmetric
PlumX Metrics
Social media, news, blog, policy document mentions
Citation Metrics
250
OpenAlex
Cite This
J. Wuyts
(2002).
The European database on small subunit ribosomal RNA.
Nucleic Acids Research
, 30
(1)
, 183-185.
https://doi.org/10.1093/nar/30.1.183
Identifiers
- DOI
- 10.1093/nar/30.1.183