Abstract

Using a transformation of the rigid body equations of motion due to Evans [4], a new algorithm is presented for the molecular dynamics simulation of rigid polyatomic molecules. The algorithm consists of solving the eulerian rigid body equations, using quaternions to represent orientations, by a fifth-order predictor corrector method. Compared to previous methods, it is shown that this algorithm leads to an order of magnitude increase in computing speed.

Keywords

QuaternionRigid bodyMolecular dynamicsSingularityEulerian pathRigid body dynamicsClassical mechanicsPolyatomic ionTransformation (genetics)Equations of motionMotion (physics)Dynamics (music)AlgorithmMathematicsPhysicsMathematical analysisGeometryMoleculeChemistryQuantum mechanics

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Publication Info

Year
1977
Type
article
Volume
34
Issue
2
Pages
327-331
Citations
493
Access
Closed

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Denis J. Evans, Sohail Murad (1977). Singularity free algorithm for molecular dynamics simulation of rigid polyatomics. Molecular Physics , 34 (2) , 327-331. https://doi.org/10.1080/00268977700101761

Identifiers

DOI
10.1080/00268977700101761