Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)

Henrik Aspeborg; Pedro M. Coutinho; Yang Wang; Harry Brumer; Bernard Henrissat

doi:10.1186/1471-2148-12-186

Keywords

SubfamilyBiologyContext (archaeology)Glycoside hydrolasePhylogenetic treeGeneticsComputational biologyEvolutionary biologyGene

Affiliated Institutions

Related Publications

A hierarchical classification of polysaccharide lyases for glycogenomics

Vincent Lombard , Thomas Bernard , Corinne Rancurel +3 more

Carbohydrate-active enzymes face huge substrate diversity in a highly selective manner using only a limited number of available folds. They are therefore subjected to multiple d...

2010 Biochemical Journal 354 citations

A classification of glycosyl hydrolases based on amino acid sequence similarities

Bernard Henrissat

The amino acid sequences of 301 glycosyl hydrolases and related enzymes have been compared. A total of 291 sequences corresponding to 39 EC entries could be classified into 35 f...

1991 Biochemical Journal 3134 citations

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

Brandi L. Cantarel , P. M. Coutinho , Corinne Rancurel +3 more

The Carbohydrate-Active Enzyme (CAZy) database is a knowledge-based resource specialized in the enzymes that build and breakdown complex carbohydrates and glycoconjugates. As of...

2008 Nucleic Acids Research 5788 citations

Dividing the large glycoside hydrolase family 13 into subfamilies: towards improved functional annotations of -amylase-related proteins

Mark Stam , Étienne Danchin , Corinne Rancurel +2 more

Family GH13, also known as the alpha-amylase family, is the largest sequence-based family of glycoside hydrolases and groups together a number of different enzyme activities and...

2006 Protein Engineering Design and Selection 601 citations

Consolidation of glycosyl hydrolase family 30: A dual domain 4/7 hydrolase family consisting of two structurally distinct groups

Franz J. St John , Javier González , Edwin Pozharski

In this work glycosyl hydrolase (GH) family 30 (GH30) is analyzed and shown to consist of its currently classified member sequences as well as several homologous sequence groups...

2010 FEBS Letters 134 citations

Publication Info

Year: 2012
Type: article
Volume: 12
Issue: 1
Pages: 186-186
Citations: 480
Access: Closed

External Links

View on DOI.org

Social Impact

Altmetric

Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)

PlumX Metrics

Social media, news, blog, policy document mentions

Citation Metrics

480

OpenAlex

Cite This

APA Style

                            
                                
                                    Henrik Aspeborg, 
                                
                                    Pedro M. Coutinho, 
                                
                                    Yang Wang
                                
                                et al.
                            
                            (2012). 
                            Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5). 
                            BMC Evolutionary Biology
                            , 12
                            (1)
                            , 186-186.
                            https://doi.org/10.1186/1471-2148-12-186
                        

Identifiers

DOI: 10.1186/1471-2148-12-186