Ruth Nussinov

PRISM: protein interactions by structural matching

Prism (http://gordion.hpc.eng.ku.edu.tr/prism) is a website for protein interface analysis and prediction of putative protein-protein interactions. It is composed of a database ...

A new, structurally nonredundant, diverse data set of protein–protein interfaces and its implications

Abstract Here, we present a diverse, structurally nonredundant data set of two‐chain protein–protein interfaces derived from the PDB. Using a sequence order‐independent structur...

Protein-Protein Interfaces: Architectures and Interactions in Protein-Protein Interfaces and in Protein Cores. Their Similarities and Differences

Protein structures generally consist of favorable folding motifs formed by specific arrangements of secondary structure elements. Similar architectures can be adopted by differe...

Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop