Kiran Garimella - Researcher Profile

Publications

2 shown

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

Aaron McKenna , Matthew G. Hanna , Eric Banks +8 more

Next-generation DNA sequencing (NGS) projects, such as the 1000 Genomes Project, are already revolutionizing our understanding of genetic variation among individuals. However, t...

2010 Genome Research 28298 citations

From FastQ Data to High‐Confidence Variant Calls: The Genome Analysis Toolkit Best Practices Pipeline

Géraldine Van der Auwera , Mauricio O. Carneiro , Christopher Hartl +12 more

Abstract This unit describes how to use BWA and the Genome Analysis Toolkit (GATK) to map genome sequencing data to a reference and produce high‐quality variant calls that can b...

2013 Current Protocols in Bioinformatics 6905 citations

Frequent Co-Authors

Researcher Info

h-index: 2
Publications: 2
Citations: 35,203
Institution: Broad Institute

External Links

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Identifiers

ORCID: 0000-0002-6212-5736

Impact Metrics

h-index 2

h-index: Number of publications with at least h citations each.