Harold Pimentel

University of California, Berkeley ORCID: 0000-0001-8556-2499

3

h-index

3

Publications

35,997

Citations

Publications

3 shown

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

Daehwan Kim , Geo Pertea , Cole Trapnell +3 more

2013 Genome biology 13345 citations

Near-optimal probabilistic RNA-seq quantification

Nicolas Bray , Harold Pimentel , Páll Melsted +1 more

2016 Nature Biotechnology 10114 citations

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

Cole Trapnell , Adam Roberts , Loyal A. Goff +7 more

2012 Nature Protocols 12538 citations

Frequent Co-Authors

Daehwan Kim

The University of Texas Southwestern Medical Center

Geo Pertea

University of Maryland, College Park

Cole Trapnell

University of Washington

Ryan Kelley

Illumina (United States)

Steven L. Salzberg

Johns Hopkins Medicine

Nicolas Bray

Innovative Genomics Institute

Researcher Info

h-index: 3
Publications: 3
Citations: 35,997
Institution: University of California, Berkeley

External Links

ORCID Profile Google Scholar

Identifiers

ORCID: 0000-0001-8556-2499

Impact Metrics

h-index 3

h-index: Number of publications with at least h citations each.